3 NVIDIA Grace-Hopper nodes (GH200 480) are now available. See Using Bede for more information.



EMAN2 is a broadly based greyscale scientific image processing suite with a primary focus on processing data from transmission electron microscopes.

On Bede, EMAN2 is provided by the IBM Collaboration project.

To access these packages, first you must have a local conda installation set up and activated. See Conda for instructions on how to install and enable conda.

The CyroEM conda environment can then be loaded using:

conda activate /projects/bddir04/ibm-lfsapp/Eman2

Once loaded, the included software applications can then be used.

For more information on the use of EMAN2, please visit the EMAN2 website which includes the online documentation.