IBM Collaboration

ppc64le partitions only

The “IBM Collaboration” Software environment is only provided on ppc64le partitions/nodes (gpu, infer, test).

On Bede, the ibm-collaboration project provides several software packages which were produced in collaboration with the system vendor IBM.

• Cryo-EM - a collection of software packages for life sciences including:

  • RELION

  • CTFfind4

  • MotionCor2

  • crYOLO

  • ResMap

• EMAN2 - a scientific image processing suite with a primary focus on processing data from transmission electron microscopes.

For instructions on how to use these projects please see the Cryo-EM and EMAN2 pages.

Warning

The ibm-collaboration module does currently provide valid Environment Modules to load the included software packages. This will be addressed in the future.

Instead, follow the instructions listed for the included projects to load the software packages via conda.